Comprehensive Guide to Western Blotting Technology Technical Overview

Western Blotting (WB), also known as protein immunoblotting, is a technique that transfers total proteins from cells or tissues via electrophoresis from a gel to a solid support membrane (such as nitrocellulose membrane NC or polyvinylidene fluoride membrane PVDF), followed by detection of specific antigens using antibodies. This technology is widely used in protein expression studies, antibody activity detection, and disease diagnosis.

PVDF Membrane Usage Guide

-Pretreatment Steps

PVDF membranes are hydrophobic and require the following pretreatment:

  1. Wet Transfer Method:
  • Soak in methanol for 30 seconds (membrane changes from opaque to semi-transparent)
  • Soak in double-distilled water for 2 minutes
  • Equilibrate in transfer buffer for ≥5 minutes
  1. Semi-Dry Transfer Method:
  • Soak in methanol for 15 seconds
  • Subsequent steps are the same as the wet transfer method
-Pore Size Selection

Pore Size

Applicable Molecular Weight

Characteristics

Application Scenarios

0.22μm

<20kD

High binding capacity, high resolution

Small protein detection, precise quantification

0.45μm

>20kD

High throughput, low operational resistance

Large protein and nucleic acid transfer

Transfer Efficiency Verification

  1. Reversible Staining (Recommended):
  • Common dye: 0.2% Ponceau S (diluted in 1% acetic acid)
  • Steps: Wet with methanol → Stain for 1 minute → Rinse with double-distilled water → Completely remove with 0.1N NaOH
  1. Irreversible Staining:
  • Dyes: Amido Black, Coomassie Brilliant Blue
  • Characteristics: High sensitivity but interferes with subsequent analysis
-Membrane Selection: PVDF vs NC

Property

PVDF Membrane

NC Membrane

Physical Properties

High strength, good flexibility

Brittle, prone to breakage

Chemical Stability

Resistant to acids, bases, and organic solvents

Sensitive to acids and bases

Temperature Range

-10°C~150°C

-10°C~40°C

Transparency

High

Milky white

Cost

Higher

Lower

Applications

Harsh conditions, small proteins, multiple detections, long-term storage

Routine detection, large proteins, fluorescent labeling, low-budget projects

Key Considerations

-Transfer Structure Preparation:
  • Thoroughly clean transfer equipment
  • Carefully remove bubbles in the “sandwich” structure
  • Ensure tight contact between gel and membrane
-Transfer Condition Optimization:
  • Maintain temperature control with ice bath
  • Standard conditions: 1.0mm thick 10% gel, 300mA transfer for 1-1.5 hours (250kD protein)
  • Small proteins (<20kD):
    • Omit SDS from transfer buffer
    • Add 10-20% methanol
    • Use 0.22μm PVDF membrane
  • Reduce transfer intensity (200-250mA, 15-30min)
-Antibody Stripping and Membrane Storage:
  • Stripping: Use a combination of heating and detergents
  • Storage:
    • Short-term: 4°C (≤2 weeks)
    • Medium-term: -20°C (≤2 months)
    • Long-term: -70°C
  • Storage method: Sandwich between filter paper and cardstock, store in sealed bags

Technical Summary

  1. Prioritize 0.22μm PVDF membranes for small protein detection
  2. Temperature control during transfer is critical
  3. Ponceau S staining is the preferred method for verifying transfer efficiency
  4. PVDF membranes are suitable for harsh experimental conditions and long-term storage
  5. NC membranes are better for routine detection and cost-sensitive projects

By strictly adhering to the above operational standards and technical points, reliable and highly reproducible Western Blotting results can be achieved.

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